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About PAMDB
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compounds
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superpathway of lipopolysaccharide biosynthesis
Pathway
Source
ID
Pathway
BioCyc
LPSSYN-PWY
Metabolites
PAMDB ID
Metabolite Name
View
PAMDB120486
lipid+A-core
MetaboCard
PAMDB120560
galactosyl-(glucosyl)3-(heptosyl)3-Kdo2-lipid+A-bisphosphate
MetaboCard
PAMDB120553
galactosyl-(glucosyl)2-(heptosyl)3-Kdo2-lipid+A-bisphosphate
MetaboCard
PAMDB110518
UDP-alpha-D-galactose
MetaboCard
PAMDB120546
galactosyl-glucosyl-(heptosyl)3-Kdo2-lipid+A-bisphosphate
MetaboCard
PAMDB120545
glucosyl-(heptosyl)3-Kdo2-lipid+A-bisphosphate
MetaboCard
PAMDB120536
glucosyl-(heptosyl)3-Kdo2-lipid+A-phosphate
MetaboCard
PAMDB120526
glucosyl-(heptosyl)2-Kdo2-lipid+A-phosphate
MetaboCard
PAMDB110506
UDP-alpha-D-glucose
MetaboCard
PAMDB120523
glucosyl-(heptosyl)2-Kdo2-lipid+A
MetaboCard
PAMDB120518
(heptosyl)2-Kdo2-lipid+A
MetaboCard
PAMDB006297
ADP-L-glycero-beta-D-manno-heptose
MetaboCard
PAMDB120294
heptosyl-Kdo2-lipid+A
MetaboCard
PAMDB110365
(KDO)2-lipid+A
MetaboCard
PAMDB110366
(KDO)2-(lauroyl)-lipid+IVA
MetaboCard
PAMDB110364
alpha-Kdo-(2-%3e4)-alpha-Kdo-(2-%3e6)-lipid+IVA
MetaboCard
PAMDB110367
alpha-Kdo-(2-%3e6)-lipid+IVA
MetaboCard
PAMDB110526
CMP
MetaboCard
PAMDB110597
D-ribulose+5-phosphate
MetaboCard
PAMDB110154
phosphoenolpyruvate
MetaboCard
PAMDB110599
D-arabinose+5-phosphate
MetaboCard
PAMDB110001
3-deoxy-D-manno-octulosonate+8-phosphate
MetaboCard
PAMDB110244
phosphate
MetaboCard
PAMDB110525
CTP
MetaboCard
PAMDB110002
3-deoxy-D-manno-octulosonate
MetaboCard
PAMDB110523
CMP-3-deoxy-D-manno-octulosonate
MetaboCard
PAMDB110246
diphosphate
MetaboCard
PAMDB110519
UDP-N-acetyl-alpha-D-glucosamine
MetaboCard
PAMDB006332
UDP-3-O-%5b(3R)-3-hydroxymyristoyl%5d-N-acetyl-alpha-D-glucosamine
MetaboCard
PAMDB110762
acetate
MetaboCard
PAMDB001696
UDP-3-O-(3-hydroxymyristoyl)-alpha-D-glucosamine
MetaboCard
PAMDB000142
H2O
MetaboCard
PAMDB110527
UMP
MetaboCard
PAMDB110477
ATP
MetaboCard
PAMDB003481
lipid+IVA
MetaboCard
PAMDB110479
ADP
MetaboCard
PAMDB003524
UDP-2,3-bis%5bO-(3R)-3-hydroxymyristoyl%5d-alpha-D-glucosamine
MetaboCard
PAMDB110084
2,3-bis%5b(3R)-3-hydroxymyristoyl%5d-alpha-D-glucosaminyl+1-phosphate
MetaboCard
PAMDB001633
H+
MetaboCard
PAMDB110085
lipid+A+disaccharide
MetaboCard
PAMDB110529
UDP
MetaboCard
Proteins
Genome ID
Protein Name
View
PA3643
lipid-A-disaccharide synthase
ProteinCard
PA2981
tetraacyldisaccharide 4'-kinase
ProteinCard
PA1792
UDP-2,3-diacylglucosamine hydrolase
ProteinCard
PA3646
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
ProteinCard
PA4406
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
ProteinCard
PA3644
UDP-N-acetylglucosamine acyltransferase
ProteinCard
PA2979
3-deoxy-manno-octulosonate cytidylyltransferase
ProteinCard
PA3636
2-dehydro-3-deoxyphosphooctonate aldolase
ProteinCard
PA4457
arabinose-5-phosphate isomerase KdsD
ProteinCard
PA4988
3-deoxy-D-manno-octulosonic-acid transferase
ProteinCard
PA3242
lipid A biosynthesis lauroyl acyltransferase
ProteinCard
PA0011
lipid A biosynthesis lauroyl acyltransferase
ProteinCard
PA5011
heptosyltransferase I
ProteinCard