Identification
Name: Glycolate oxidase subunit glcD
Synonyms: Not Available
Gene Name: glcD
Enzyme Class:
Biological Properties
General Function: Involved in catalytic activity
Specific Function: Specific function unknown
Cellular Location: Not Available
KEGG Pathways:
KEGG Reactions:
Thumb+ThumbThumb+Thumb
(S)-2-Hydroxyacid+Thumb2-Oxo acid+Thumb
(S)-2-Hydroxyacid + Oxygen ↔ 2-Oxo acid + Hydrogen peroxide
ReactionCard
SMPDB Reactions:
Thumb+an oxidized electron-transfer flavoprotein?Reduced acceptor+Thumb
Glycolic acid + an oxidized electron-transfer flavoprotein? → Reduced acceptor + Glyoxylic acid
ReactionCard
2 Thumb+2 an oxidized electron-transfer flavoprotein?2 Reduced acceptor+2 Thumb
2 Glycolic acid + 2 an oxidized electron-transfer flavoprotein? → 2 Reduced acceptor + 2 Glyoxylic acid
ReactionCard
PseudoCyc/BioCyc Reactions:
Thumb+ThumbThumb+Thumb
(S)-2-Hydroxyacid+Thumb2-Oxo acid+Thumb
(S)-2-Hydroxyacid + Oxygen ↔ 2-Oxo acid + Hydrogen peroxide
ReactionCard
Thumb+an oxidized electron-transfer flavoprotein?Reduced acceptor+Thumb
Glycolic acid + an oxidized electron-transfer flavoprotein? → Reduced acceptor + Glyoxylic acid
ReactionCard
2 Thumb+2 an oxidized electron-transfer flavoprotein?2 Reduced acceptor+2 Thumb
2 Glycolic acid + 2 an oxidized electron-transfer flavoprotein? → 2 Reduced acceptor + 2 Glyoxylic acid
ReactionCard
Thumb
an (S)-2-hydroxyacid + oxygen → hydrogen peroxide + a 2-oxo carboxylate
ReactionCard
PAMDB110053+PAMDB000624PAMDB110768+PAMDB001640
Acceptor+PAMDB110053Donor-H2+PAMDB110768
Acceptor + glycolate → Donor-H2 + glyoxylate
ReactionCard
Complex Reactions:
Thumb+ThumbThumb+Thumb
Thumb+Menaquinone 8Thumb+Thumb
Thumb+ThumbThumb+Thumb
Transports: Not Available
Metabolites:
PAMDB IDNameView
PAMDB0015632-Demethylmenaquinol 8MetaboCard
PAMDB0015642-Demethylmenaquinone 8MetaboCard
PAMDB004153GlycolateMetaboCard
PAMDB000475Glycolic acidMetaboCard
PAMDB000043Glyoxylic acidMetaboCard
PAMDB001640Hydrogen peroxideMetaboCard
PAMDB001653Menaquinol 8MetaboCard
PAMDB000624OxygenMetaboCard
PAMDB000237Ubiquinol-8MetaboCard
PAMDB001700Ubiquinone-8MetaboCard
GO Classification:
Component
glycolate oxidase complex
macromolecular complex
protein complex
Function
(S)-2-hydroxy-acid oxidase activity
adenyl nucleotide binding
binding
catalytic activity
FAD or FADH2 binding
glycolate oxidase activity
nucleoside binding
oxidoreductase activity
oxidoreductase activity, acting on CH-OH group of donors
oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor
purine nucleoside binding
Gene Properties
Locus tag: PA5355
Strand: -
Entrez Gene ID: 881631
Accession: NP_254042.1
GI: 15600548
Sequence start: 6022203
Sequence End: 6023702
Sequence Length: 1499
Gene Sequence:
>PA5355
ATGAACATCCTCTACGACGAGCGTCTGGACGGTCCGCTGCCGCAGGTGGACAAGGATGGCCTGCTGGCCGAGTTGCGCCTCCGCCTGCCCGACCTCGAACTGCTGCACGCCGCGGAAGACCTGCGTCCCTACGAGTGCGACGGACTCTCGGCGTATCGCTGCACGCCGTTGCTGGTGGCATTGCCGGAACGCATCGAACAGGTTCAGGGCCTGCTCGCCCTCTGCCATCGGCTGAAGGTGCCGGTCGTGGCGCGCGGTGCCGGCACCGGCCTGTCCGGCGGCGCGCTGCCGCTGGAGAACGGCGTACTGCTGGTGATGGCGCGTTTCCGGCGGATCCTCGAGATCGATCCGCTGGGTCGTTTCGCCCGGGTCCAGCCTGGCGTGCGCAACCTGGCGATCTCCCAGGCCGCTGCCCCTCATGGTCTGTACTATGCACCGGACCCGTCCTCGCAGATCGCCTGCTCCATCGGCGGCAACGTCGCGGAGAACGCCGGCGGCGTGCATTGCCTGAAGTACGGCCTGACCGTGCACAACCTGTTGCAGGTGGACATCGTGACCCTGGAAGGCGAGCGCCTGAGCCTGGGGTCCAGCGCCCTGGACAGCGCCGGCTTCGACCTGCTGGCGCTGTTCACCGGCTCCGAAGGGCTGCTCGGCGTGGTGGTGGAGGTCACCGTCAGGCTGTTGCCGCGCCCGCCGGTGGCGAAGGTCCTGCTGGCCAGCTTCGACGATGTGGAAAGCGCCGGGCGGGCGGTGGCCGACCTGATCGGTGCCGGCATCGTCCCGGCCGGGCTGGAAATGATGGACAACCTGTCGATCCGCGCCGCTGAGGATTTCATCCACGCCGGTTACCCGGTCGACGCGGCGGCGATCCTGCTCTGCGAACTGGATGGCGTGGAAGCCGACGTGCACGAGGATTGCGAGCGGGTCCGCGAGCTGTTCGAGGCGGCTGGCGCCACCTCGGTGCGACAGGCCCAAGACGAGGCCGAGCGCCAGCGCTTCTGGGCCGGGCGCAAGAATGCGTTTCCGGCGGTCGGGCGGATTTCCCCCGATTACTACTGCATGGACGGCAGCATCCCGCGCCGCGAGCTGCCGCGGGTGCTGCATGGCATCGCCGAGCTTTCGCGCGAATACGGCCTGCGGGTGGCCAACGTATTCCACGCCGGCGACGGCAACATGCACCCGCTGATCCTCTTCGACGCCAACCTGGCGGGCGAGCTGGAGCGCGCTGAAGCGCTGGGCGGCAGGATCCTCGAGTTGTGCGTGGCGGTAGGCGGCAGCATCACCGGCGAACATGGCGTCGGCCGCGAGAAGATCAACCAGATGTGCGCTCAGTTCAATGCCGACGAGCTGACCCTGTTCCACGCCGTGAAGGCGGCGTTCGACCCGGCCGGGCTGCTCAATCCCGGCAAGAACGTGCCCACCCTGCATCGCTGCGCCGAGTTCGGCGCCATGCACGTCCACCACGGTCGACTGCCGTTCCCCGAACTGGAGCGTTTCTGA
Protein Properties
Protein Residues: 499
Protein Molecular Weight: 53.7 kDa
Protein Theoretical pI: 5.06
Hydropathicity (GRAVY score): 0.102
Charge at pH 7 (predicted): -17.46
Protein Sequence:
>PA5355
MNILYDERLDGPLPQVDKDGLLAELRLRLPDLELLHAAEDLRPYECDGLSAYRCTPLLVALPERIEQVQGLLALCHRLKVPVVARGAGTGLSGGALPLENGVLLVMARFRRILEIDPLGRFARVQPGVRNLAISQAAAPHGLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNLLQVDIVTLEGERLSLGSSALDSAGFDLLALFTGSEGLLGVVVEVTVRLLPRPPVAKVLLASFDDVESAGRAVADLIGAGIVPAGLEMMDNLSIRAAEDFIHAGYPVDAAAILLCELDGVEADVHEDCERVRELFEAAGATSVRQAQDEAERQRFWAGRKNAFPAVGRISPDYYCMDGSIPRRELPRVLHGIAELSREYGLRVANVFHAGDGNMHPLILFDANLAGELERAEALGGRILELCVAVGGSITGEHGVGREKINQMCAQFNADELTLFHAVKAAFDPAGLLNPGKNVPTLHRCAEFGAMHVHHGRLPFPELERF
References
External Links:
Resource Link
Genome ID: PA5355
Entrez Gene ID: 881631
NCBI Protein ID: 15600548
General Reference: PaperBLAST - Find papers about PA5355 and its homologs