Oxygen-independent coproporphyrinogen-III oxidase-like protein yggW (PA0386)

Identification
Name: Oxygen-independent coproporphyrinogen-III oxidase-like protein yggW
Synonyms: Not Available
Gene Name: yggW
Enzyme Class:
Biological Properties
General Function: Involved in coproporphyrinogen oxidase activity
Specific Function: Not Available
Cellular Location: Not Available
KEGG Pathways:
  • Porphyrin and chlorophyll metabolism pae00860
KEGG Reactions:
2 Thumb+Thumb ↔ 2 Thumb+2 Thumb+2 Thumb+Thumb
2 S-Adenosylmethionine + Coproporphyrin III ↔ 2 Carbon dioxide + 2 5'-Deoxyadenosine + 2 L-Methionine + Protoporphyrinogen IX
ReactionCard
Thumb+2 Thumb ↔ Thumb+2 Thumb+2 Thumb+2 Thumb
Coproporphyrin III + 2 S-Adenosylmethionine ↔ Protoporphyrinogen IX + 2 Carbon dioxide + 2 L-Methionine + 2 5'-Deoxyadenosine
ReactionCard
SMPDB Reactions: Not Available
PseudoCyc/BioCyc Reactions:
2 Thumb+Thumb ↔ 2 Thumb+2 Thumb+2 Thumb+Thumb
2 S-Adenosylmethionine + Coproporphyrin III ↔ 2 Carbon dioxide + 2 5'-Deoxyadenosine + 2 L-Methionine + Protoporphyrinogen IX
ReactionCard
Thumb+2 Thumb ↔ Thumb+2 Thumb+2 Thumb+2 Thumb
Coproporphyrin III + 2 S-Adenosylmethionine ↔ Protoporphyrinogen IX + 2 Carbon dioxide + 2 L-Methionine + 2 5'-Deoxyadenosine
ReactionCard
PAMDB110031+PAMDB000624+PAMDB001633 → PAMDB110804+PAMDB000568+PAMDB000142
coproporphyrinogen III + Oxygen + Hydrogen ion → protoporphyrinogen IX + Carbon dioxide + Water
ReactionCard
Complex Reactions: Not Available
Transports: Not Available
Metabolites:
PAMDB IDNameView
PAMDB0015835'-DeoxyadenosineMetaboCard
PAMDB000568Carbon dioxideMetaboCard
PAMDB000151Coproporphyrin IIIMetaboCard
PAMDB000175L-MethionineMetaboCard
PAMDB000254Protoporphyrinogen IXMetaboCard
PAMDB000289S-AdenosylmethionineMetaboCard
GO Classification:
Component
cell part
cytoplasm
intracellular part
Function
binding
catalytic activity
coproporphyrinogen oxidase activity
iron-sulfur cluster binding
metal cluster binding
oxidoreductase activity
oxidoreductase activity, acting on the CH-CH group of donors
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
Process
metabolic process
nitrogen compound metabolic process
oxidation reduction
porphyrin biosynthetic process
porphyrin metabolic process
tetrapyrrole metabolic process
Gene Properties
Locus tag: PA0386
Strand: -
Entrez Gene ID: 878688
Accession: NP_249077.1
GI: 15595583
Sequence start: 427586
Sequence End: 428740
Sequence Length: 1154
Gene Sequence: 
>PA0386
GTGACCCAAGCCACCCCGTTCCAGCTCCCGCCCCTGGCCCTGTACGTGCACATCCCGTGGTGCGTGCGCAAGTGCCCGTATTGCGACTTCAACTCCCACGCCGCTGGCCCGGAGCTGCCCGAAGAGGCCTATGTCGACGCCCTGCTCGCCGACCTGGAGCAAGACCTGCGCCATGTCCACGGCCGGCGCCTGGGTTCGATCTTCTTCGGCGGCGGCACGCCCAGCCTGTTCTCGGCCAAGGCCCTGGGCCGGCTACTGGAAGGCGTCGAGCGCAGGGTCGGCTTCGCCGACGGCATCGAGATCACCCTGGAAGCCAATCCCGGCACCTTCGAACAGGTCAAGTTCGCCGACTACCGGCGCCTCGGCATCAATCGCCTGTCCATCGGCGTGCAGAGCTTCCAGGCCGACAAGCTGCAGGCCCTGGGGCGCATCCACGACGGCGCCGAGGCAGTGCGCGCCGCCGACATGGCGCGCCAGGCCGGCTTCGACAACTTCAACCTCGACCTGATGCACGGCCTGCCCGGGCAGAGCCTCGACGACGCCCTGGCCGACCTGCGCCAGGCCCTCGCCCTGGCCCCCACGCACCTCTCCTGGTACCAACTGACCATGGAGCCGAACACGGTGTTCTGGAGCCAGCCGCCGGAGCTGCCCGAGGACGACATCCTCTGGGACATCCAGGAAGCCGGCCAGGCCCTGCTCGACGAGCACGGCTACCGCCAGTACGAGACCTCCGCCTACGCCCGCGACGGCCTGCGCGCCCGGCACAACCTGAACTACTGGAGCTTCGGCGACTTCCTCGGCATCGGCGCCGGCGCCCACGCCAAGCTGAGCGCGCCGGACGGACGCATCGTGCGGACCTGGAAGACCCGCCTGCCGAAGGACTACCTCAACCCGCAAAAGGCCTTCCAGGCCGGCGAGCGCCCGCTGGAAGCGGCCGACCTGCCATTCGAGTTCATGATGAACGTGCTGCGCCTGGTCGACGGCGTCCCCGCCGCGCTCTACCCGCAGCGCACCGGCCAGCCACTGGCGGCGATCGCCGATGCCTGCGCCGCCGCGCGCGACGCCGGGCTGCTCGCCGACGACCCGCAGCACCTGCGTCCCAGCGAACGCGGCCAGCTGTTCCTCAACGACCTGCTGCAACATTTCCTGCCGTGA
Protein Properties
Protein Residues: 384
Protein Molecular Weight: 42.5 kDa
Protein Theoretical pI: 5.24
Hydropathicity (GRAVY score): -0.248
Charge at pH 7 (predicted): -11.23
Protein Sequence: 
>PA0386
MTQATPFQLPPLALYVHIPWCVRKCPYCDFNSHAAGPELPEEAYVDALLADLEQDLRHVHGRRLGSIFFGGGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIGVQSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQALALAPTHLSWYQLTMEPNTVFWSQPPELPEDDILWDIQEAGQALLDEHGYRQYETSAYARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIVRTWKTRLPKDYLNPQKAFQAGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPLAAIADACAAARDAGLLADDPQHLRPSERGQLFLNDLLQHFLP
References
External Links:
Resource Link
Genome ID: PA0386
Entrez Gene ID: 878688
NCBI Protein ID: 15595583
General Reference: PaperBLAST - Find papers about PA0386 and its homologs