Identification
Name: Prolyl-tRNA synthetase
Synonyms:
  • Global RNA synthesis factor
  • Proline--tRNA ligase
  • ProRS
Gene Name: proS
Enzyme Class:
Biological Properties
General Function: Involved in nucleotide binding
Specific Function: Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction:proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). Misacylated Cys-tRNA(Pro) is not edited by ProRS, but instead may be edited in trans by ybaK
Cellular Location: Cytoplasm
KEGG Pathways:
KEGG Reactions:
Thumb+Thumb+tRNA(Pro)+tRNA(Pro)Thumb+Thumb+L-Prolyl-tRNA(Pro)+Thumb
Thumb+Thumb+tRNA(Pro)Thumb+Thumb+L-Prolyl-tRNA(Pro)
SMPDB Reactions:
L-Proline+Thumb+Thumb+tRNA(Pro)+ThumbThumb+Pyrophosphate+L-prolyl-tRNA(Pro)
L-Proline + Adenosine triphosphate + Hydrogen ion + tRNA(Pro) + L-ProlineAdenosine monophosphate + Pyrophosphate + L-prolyl-tRNA(Pro)
ReactionCard
PseudoCyc/BioCyc Reactions:
Thumb+Thumb+tRNA(Pro)+tRNA(Pro)Thumb+Thumb+L-Prolyl-tRNA(Pro)+Thumb
Thumb+Thumb+tRNA(Pro)Thumb+Thumb+L-Prolyl-tRNA(Pro)
Thumb+Thumb+tRNA(Pro)Thumb+Thumb+L-prolyl-tRNA(Pro)
L-Proline+Thumb+Thumb+tRNA(Pro)+ThumbThumb+Pyrophosphate+L-prolyl-tRNA(Pro)
L-Proline + Adenosine triphosphate + Hydrogen ion + tRNA(Pro) + L-ProlineAdenosine monophosphate + Pyrophosphate + L-prolyl-tRNA(Pro)
ReactionCard
Thumb
a tRNApro + L-proline + ATP + H+ → an L-prolyl-[tRNApro] + AMP + diphosphate
ReactionCard
Complex Reactions:
Thumb+Thumb+tRNA(Pro)Thumb+Thumb+L-prolyl-tRNA(Pro)
Transports: Not Available
Metabolites:
PAMDB IDNameView
PAMDB000014Adenosine monophosphateMetaboCard
PAMDB000148Adenosine triphosphateMetaboCard
PAMDB001633Hydrogen ionMetaboCard
PAMDB000064L-ProlineMetaboCard
PAMDB004396L-Prolyl-tRNA(Pro)MetaboCard
PAMDB000633PyrophosphateMetaboCard
GO Classification:
Component
cell part
cytoplasm
intracellular part
Function
adenyl nucleotide binding
adenyl ribonucleotide binding
aminoacyl-tRNA ligase activity
ATP binding
binding
catalytic activity
ligase activity
ligase activity, forming aminoacyl-tRNA and related compounds
ligase activity, forming carbon-oxygen bonds
nucleoside binding
nucleotide binding
proline-tRNA ligase activity
purine nucleoside binding
Process
biosynthetic process
cellular macromolecule biosynthetic process
cellular macromolecule metabolic process
macromolecule biosynthetic process
macromolecule metabolic process
metabolic process
ncRNA metabolic process
prolyl-tRNA aminoacylation
RNA metabolic process
translation
tRNA aminoacylation
tRNA aminoacylation for protein translation
tRNA metabolic process
Gene Properties
Locus tag: PA0956
Strand: -
Entrez Gene ID: 879563
Accession: NP_249647.1
GI: 15596153
Sequence start: 1041689
Sequence End: 1043404
Sequence Length: 1715
Gene Sequence:
>PA0956
ATGCGTACCAGTCAGTATCTGCTTTCCACGCTCAAAGAAACCCCCGCCGACGCGGTGGTAATCAGCCATCAACTGCTGCTTCGCGCCGGCATGATCCGTCGCCTGGCCTCGGGTCTCTACACCTGGCTGCCAATGGGCCTGCGGGTACTGCGCAAGGTCGAGACCATCGTCCGCGAGGAAATGAACGCTGCCGGCGCCCTGGAAGTGCTGATGCCGGCGGTGCAGCCGGCCGAGCTGTGGCAGGAGTCGGGGCGCTGGGAGCAATACGGCCCTGAGCTGCTGCGCCTGAAGGACCGCCACGAGCGCGAATTCTGCGTAGGCCCGACCCACGAAGAAGTGATCACCGACCTCGCGCGCAACGAGCTGAACAGCTACAAGCAACTGCCGATCAACTTCTATCAGATCCAGACCAAGTTCCGCGATGAGATCCGCCCGCGCTTCGGCCTGATGCGCGGACGCGAATTCATCATGAAGGACGCCTATTCCTTCCACCTGAGCCAGGACTCGCTGCAGCAGACCTACGACGGGATGTACCAGGCGTACAGCAAGATCTTCTCCCGCCTCGGCCTGGATTTCCGTCCCGTGCAAGCCGACAACGGCTCCATCGGCGGCAGCGGCTCCCATGAGTTCCACGTGCTGGCCAACTCCGGCGAGGACGATATCGTCTTCAGCGACAGCTCCGACTACGCCGCGAACATCGAGAAGGCCGAAGCCGTGCCGCGCGAGAGCGCCCGCGGCAGCGCCACCGAGGACATGCGCCTGGTCGACACGCCCAACACCAAGACCATCGCGGCCCTGGTGGACGGCTTCCAGCTACCGATCGAGAAAACCATCAAGACCCTGGTGGTGCATGGCGCCGAAGAAGGCACCCTGGTCGCCCTGATCGTCCGCGGTGATCACGAGCTCAACGAAATCAAGGCCGCCAACCAGCCGCTGGTCGCCAGCCCGCTGGTATTCGCTTCGGAGGCCGAGATCCGTGCCGCCATCGGTGCCGGCCCCGGCTCGCTGGGCCCGGTCAACCTGCCGATCGCCTGCATCGTCGACCGCTCCGTCGCCCTGATGAGCGATTTCGCCGCTGGCGCCAACATCGAGGACAAGCACTACTTCGGCGTGAACTGGGAGCGCGACCTGCCGCTGCCCGAGGTCGCCGACCTGCGCAATGTCGTCGAAGGCGACCCCAGCCCGGACGGCAAGGGCACCCTGGTGATCAAGCGCGGCATCGAGGTCGGTCATATCTTCCAGCTTGGCACCAAGTACAGCGAAGCGATGAAGCTGAGCGTCCTGAGCGAACAGGGCAAGCCGGTCAACCTGATCATGGGCTGCTACGGCATCGGCGTATCCCGCGTGGTCGCCGCCGCCATCGAGCAGAACCATGACGAGCGCGGCATTCTCTGGCCAAGCGCATTGGCGCCGTTCCAGATCGCCCTGGTACCGCTGAAGTACGAAACCGAGAGCGTCAAGCAGGCGACCGACAAGCTCTATGCCGAGCTGACCGCAGCCGGTTTCGAAGTGCTGCTGGACGATCGCGACAAGAAGACCAGCCCCGGGGTGAAGTTCGCCGACATGGAGCTGATCGGCATTCCCCACCGCATCGTGATCAGCGACCGCGGCCTCAGCGAAGGCGTCCTGGAATACAAGGGCCGCCGCGACAGCGAGTCGCAGAACCTGCCGATCGGCGAACTGATGTCGTTCATCACCGAAAAACTCAGCCGCTGA
Protein Properties
Protein Residues: 571
Protein Molecular Weight: 63.1 kDa
Protein Theoretical pI: 5.09
Hydropathicity (GRAVY score): -0.194
Charge at pH 7 (predicted): -15.16
Protein Sequence:
>PA0956
MRTSQYLLSTLKETPADAVVISHQLLLRAGMIRRLASGLYTWLPMGLRVLRKVETIVREEMNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLKDRHEREFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHLSQDSLQQTYDGMYQAYSKIFSRLGLDFRPVQADNGSIGGSGSHEFHVLANSGEDDIVFSDSSDYAANIEKAEAVPRESARGSATEDMRLVDTPNTKTIAALVDGFQLPIEKTIKTLVVHGAEEGTLVALIVRGDHELNEIKAANQPLVASPLVFASEAEIRAAIGAGPGSLGPVNLPIACIVDRSVALMSDFAAGANIEDKHYFGVNWERDLPLPEVADLRNVVEGDPSPDGKGTLVIKRGIEVGHIFQLGTKYSEAMKLSVLSEQGKPVNLIMGCYGIGVSRVVAAAIEQNHDERGILWPSALAPFQIALVPLKYETESVKQATDKLYAELTAAGFEVLLDDRDKKTSPGVKFADMELIGIPHRIVISDRGLSEGVLEYKGRRDSESQNLPIGELMSFITEKLSR
References
External Links:
Resource Link
Genome ID: PA0956
Entrez Gene ID: 879563
NCBI Protein ID: 15596153
General Reference: PaperBLAST - Find papers about PA0956 and its homologs