Identification
Name: Multifunctional non-homologous end joining protein LigD probable ATP-dependent DNA ligase
Synonyms: Not Available
Gene Name: ligD
Enzyme Class: Not Available
Biological Properties
General Function: DNA recombination, DNA repair, DNA replication, synthesis of RNA primer, DNA biosynthetic process, RNA phosphodiester bond hydrolysis, exonucleolytic
Specific Function: DNA primase activity, DNA ligase (ATP) activity, ATP binding, DNA-directed DNA polymerase activity, exoribonuclease activity, nucleotidyltransferase activity
Cellular Location: Cytoplasmic
KEGG Pathways:
    KEGG Reactions: Not Available
    SMPDB Reactions: Not Available
    PseudoCyc/BioCyc Reactions:
    DEOXYNUCLEOTIDESM+PAMDB110477+DeoxynucleotidesPAMDB110478+PAMDB110246+Deoxynucleotides
    DEOXYNUCLEOTIDESM + ATP + Deoxynucleotides → AMP + diphosphate + Deoxynucleotides
    ReactionCard
    Complex Reactions: Not Available
    Transports: Not Available
    Metabolites: Not Available
    GO Classification:
    Function
    DNA primase activity
    DNA ligase (ATP) activity
    ATP binding
    DNA-directed DNA polymerase activity
    exoribonuclease activity
    nucleotidyltransferase activity
    Process
    DNA recombination
    DNA repair
    DNA replication, synthesis of RNA primer
    DNA biosynthetic process
    RNA phosphodiester bond hydrolysis, exonucleolytic
    Gene Properties
    Locus tag: PA2138
    Strand: +
    Entrez Gene ID: 880451
    Accession: NP_250828.1
    GI: 15597334
    Sequence start: 2353086
    Sequence End: 2355608
    Sequence Length: 2522
    Gene Sequence:
    >PA2138
    ATGCCCAGCAGCAAGCCGCTCGCCGAGTACGCCCGCAAGCGCGATTTCCGCCAGACCCCGGAGCCCAGCGGCCGCAAGCCTCGCAAGGACAGCACCGGGCTGCTCCGCTATTGCGTCCAGAAGCACGACGCCAGCCGCCTGCACTACGACTTCCGCCTGGAGCTGGATGGCACCCTGAAGAGCTGGGCGGTGCCCAAGGGGCCGTGCCTCGACCCGGCGGTGAAGCGGCTCGCGGTGCAGGTTGAGGACCATCCGCTGGACTATGCCGATTTCGAAGGCAGCATCCCCCAGGGGCACTACGGCGCCGGCGATGTCATCGTCTGGGACCGAGGCGCCTGGACGCCTCTGGACGATCCGCGCGAGGGCCTGGAAAAGGGCCATCTCAGCTTCGCCCTGGATGGCGAGAAACTCTCCGGGCGTTGGCACCTGATCCGCACCAACCTGCGCGGCAAGCAGTCCCAGTGGTTCCTGGTCAAGGCCAAGGACGGCGAGGCGCGCAGCCTGGATCGCTTCGACGTGCTGAAGGAGCGTCCCGACAGCGTGCTCAGCGAGCGTACGCTGCTGCCCCGCCATGGCGAAGCCGCCACGCCCGCGGCCAGGCCGGCGCGACGCGGCAAGAGCGGGGGGAAGACGCCGATGCCCGAGTGGATCGCCCCCGAGCTGGCCAGCCTGGTCGAGCAGCCTCCGCGAGGGGAGTGGGCCTACGAACTCAAGCTGGACGGCTATCGGCTGATGAGCCGCATCGAAGACGGCCACGTGCGCCTGCTGACCCGCAACGGCCATGACTGGACCGAACGCCTGCCACACCTGGAGAAGGCCTTGGCCGGGCTCGGTCTGCAGCGCAGTTGGCTGGACGGCGAACTGGTCGTCCTCGACGAGGAGGGTCGACCGGACTTCCAGGCCCTGCAGAACGCCTTCGAGGAAGGTCGCGGCGAGAACATCCTGTACGTCCTCTTCGACCTGCCGTACCACGAAGGCGAGGATCTGCGCGATGTCGCCCTGGAGGAGCGCCGCGCGCGCCTGGAGGCGCTGCTGGAAGGGCGAGACGAAGACCCGCTGCGGTTCTCCGCGACGCTCGCGGAAGACCCCCGCGACCTGCTGGCCAGCGCCTGCAAGCTCGGTCTCGAAGGCGTGATCGGCAAGCGTCTGGGCAGCGCCTACCGTTCGCGCCGCAGCAACGACTGGATCAAGCTGAAGTGCCAGTTGCGCCAGGAGTTCGTGATCGTCGGCTATACCGAGCCGAAGGGCTCTCGCCGGCATATCGGCGCCTTGCTGCTCGGCCTCTACAGCCCTGACGAGGAGCGCCGGCTGCGCTATGCCGGCAAGGTCGGCAGCGGCTTCACCGCGGCCAGCCTGAAGAAGGTCCGTGAGCGCCTGGAACCCCTCGCGGTCCGCTCCAGCCCATTGGCGAAGGTGCCGCCGGCGCGCGAGACCGGGTCGGTGCAGTGGGTGCGCCCGCAACAGCTGTGCGAGGTTTCCTATGCGCAGATGACCCGTGGCGGGATCATCCGCCAGGCAGTGTTCCACGGCTTGCGCGAAGACAAGCCGGCGCGCGAGGTGACCGGCGAGCGTCCCGCCGGCCCGCCGCCGCTGCGCGGCGCGCGCAAGGCCAGCGCCGGTGCGTCGCGGGCGGCCACCGCCGGCGTGCGCATCAGCCATCCGCAGCGGCTGATCGACCCGTCGATCCAGGCCAGCAAGCTGGAACTCGCCGAGTTCCATGCGCGCTACGCCGACCTGCTCCTGCGCGACCTGCGCGAGCGCCCGGTGTCGCTGGTGCGCGGCCCCGACGGAATCGGCGGCGAACTGTTCTTCCAGAAGCACGCGGCGCGCCTGAAGATCCCCGGCATCGTCCAGCTCGACCCGGCGCTCGATCCCGGTCATCCGCCGCTGTTGCAAATCCGCAGCGCCGAGGCGCTGGTCGGCGCGGTGCAGATGGGCAGCATCGAATTCCATACCTGGAACGCCAGCCTGGCCAACCTGGAGCGGCCCGACCGTTTCGTCCTCGACCTCGACCCGGACCCGGCGCTGCCGTGGAAGCGCATGCTCGAAGCGACCCAGCTGAGCCTGACGTTGCTCGACGAGCTGGGCCTGCGCGCCTTCCTCAAGACCAGCGGCGGCAAGGGCATGCACCTGCTGGTGCCGCTGGAGCGCCGGCATGGCTGGGACGAGGTCAAGGATTTCGCCCAGGCCATCTCCCAGCACTTGGCGCGCCTGATGCCGGAGCGTTTCTCGGCGGTTTCCGGGCCGCGCAACCGGGTCGGCAAGATCTTCGTCGACTACCTGCGCAACAGCCGCGGCGCCAGCACCGTGGCCGCCTACTCGGTGCGCGCCCGCGAAGGGTTGCCGGTGTCGGTACCGGTGTTCCGCGAGGAACTCGACTCGCTGCAGGGCGCCAACCAATGGAACCTGCGCAGTCTGCCGCAGCGCCTCGACGAACTCGCCGGCGACGATCCCTGGGCCGACTACGCCGGCACCCGCCAGCGCATCAGCGCGGCCATGCGGCGCCAGCTCGGGCGCGGCTGA
    Protein Properties
    Protein Residues: 840
    Protein Molecular Weight: 94 kDa
    Protein Theoretical pI: 9.72
    Hydropathicity (GRAVY score): -0.53
    Charge at pH 7 (predicted): 18.97
    Protein Sequence:
    >PA2138
    MPSSKPLAEYARKRDFRQTPEPSGRKPRKDSTGLLRYCVQKHDASRLHYDFRLELDGTLKSWAVPKGPCLDPAVKRLAVQVEDHPLDYADFEGSIPQGHYGAGDVIVWDRGAWTPLDDPREGLEKGHLSFALDGEKLSGRWHLIRTNLRGKQSQWFLVKAKDGEARSLDRFDVLKERPDSVLSERTLLPRHGEAATPAARPARRGKSGGKTPMPEWIAPELASLVEQPPRGEWAYELKLDGYRLMSRIEDGHVRLLTRNGHDWTERLPHLEKALAGLGLQRSWLDGELVVLDEEGRPDFQALQNAFEEGRGENILYVLFDLPYHEGEDLRDVALEERRARLEALLEGRDEDPLRFSATLAEDPRDLLASACKLGLEGVIGKRLGSAYRSRRSNDWIKLKCQLRQEFVIVGYTEPKGSRRHIGALLLGLYSPDEERRLRYAGKVGSGFTAASLKKVRERLEPLAVRSSPLAKVPPARETGSVQWVRPQQLCEVSYAQMTRGGIIRQAVFHGLREDKPAREVTGERPAGPPPLRGARKASAGASRAATAGVRISHPQRLIDPSIQASKLELAEFHARYADLLLRDLRERPVSLVRGPDGIGGELFFQKHAARLKIPGIVQLDPALDPGHPPLLQIRSAEALVGAVQMGSIEFHTWNASLANLERPDRFVLDLDPDPALPWKRMLEATQLSLTLLDELGLRAFLKTSGGKGMHLLVPLERRHGWDEVKDFAQAISQHLARLMPERFSAVSGPRNRVGKIFVDYLRNSRGASTVAAYSVRAREGLPVSVPVFREELDSLQGANQWNLRSLPQRLDELAGDDPWADYAGTRQRISAAMRRQLGRG
    References
    External Links:
    Resource Link
    Genome ID: PA2138
    Entrez Gene ID: 880451
    NCBI Protein ID: 15597334
    General Reference: PaperBLAST - Find papers about PA2138 and its homologs