P. aeruginosa Metabolome Database Protein PA0916

Identification

Name:

Ribosomal protein S12 methylthiotransferase RimO

Synonyms:

Not Available

Gene Name:

rimO

Enzyme Class:

2.8.4.4

Biological Properties

General Function:

RNA modification

Specific Function:

Catalyzes the methylthiolation of the residue Asp-89 of ribosomal protein S12.

Cellular Location:

Not Available

KEGG Pathways:

Not Available

KEGG Reactions:

Reduced acceptor

↔

2 S-Adenosylmethionine + Reduced acceptor ↔ S-Adenosylhomocysteine + 2 L-Methionine + 5'-Deoxyadenosine
ReactionCard

SMPDB Reactions:

Not Available

PseudoCyc/BioCyc Reactions:

Reduced acceptor

↔

2 S-Adenosylmethionine + Reduced acceptor ↔ S-Adenosylhomocysteine + 2 L-Methionine + 5'-Deoxyadenosine
ReactionCard

Complex Reactions:

Not Available

Transports:

Not Available

Metabolites:

PAMDB ID	Name	View
PAMDB001583	5'-Deoxyadenosine	MetaboCard
PAMDB000175	L-Methionine	MetaboCard
PAMDB000205	S-Adenosylhomocysteine	MetaboCard
PAMDB000289	S-Adenosylmethionine	MetaboCard

GO Classification:

Function
4 iron, 4 sulfur cluster binding
aspartic acid methylthiotransferase activity
cytoplasm
iron ion binding
peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
RNA modification

Gene Properties

Locus tag:

PA0916

Strand:

Entrez Gene ID:

880629

Accession:

NP_249607.1

GI:

15596113

Sequence start:

998444

Sequence End:

999766

Sequence Length:

1322

Gene Sequence:

>PA0916
ATGTCCACCCCCACTCCCAAAGTCGGCTTCGTCAGTCTTGGATGCCCCAAGGCGCTGGTCGACTCCGAGCGCATCCTCACCCAGCTGCGCATGGAAGGCTATGAGGTCGTTCCGACCTACGAAGACGCCGACGTCGTGGTGGTCAACACCTGCGGTTTCATCGACAGCGCCAAGGCCGAGTCCCTGGAAGTGATCGGCGAAGCCATCGCCGAGAACGGCAAGGTCATCGTCACCGGCTGCATGGGCGTGGAAGAGCACGCGATCCGCGACGTGCATCCAAGCGTGCTGGCGGTCACCGGCCCGCAACAGTACGAGCAGGTGGTTACCGCGGTGCACGAAGTGGTGCCGCCGAAGACCGAACACAACCCGCTGGTCGACCTGGTCCCGCCGCAAGGCGTCAAGCTGACCCCGCGCCACTACGCCTACCTGAAGATTTCCGAAGGCTGCAACCACAGTTGCAGCTTCTGCATCATCCCGTCCATGCGCGGCAAGCTGGTCAGCCGGCCGGTCGGCGACGTGCTGAGCGAGGCCGAGCGCCTGGTCAAGGCCGGGGTCAAGGAACTCCTGGTGATTTCCCAGGACACCAGCGCCTACGGCGTGGACCTGAAGTACAAGACCGACTTCTGGAACGGCCAGCCGGTCAAGACCCGCATGAAGGAACTCTGCGAGGCGCTGAGCAGCATGGGCGTGTGGGTTCGCCTGCACTACGTCTACCCGTACCCCAACGTCGACGACGTGATCCCGCTGATGGCCGCCGGCAAGCTCCTGCCGTACCTCGACATCCCCTTCCAGCATGCCAGCCCGAAGGTGCTCAAGGCCATGAAGCGCCCGGCCTTCGAGGACAAGACCCTGGCCCGGATCAAGCAGTGGCGCGAGATCTGCCCGGAACTGACCATCCGCTCGACCTTCATCGTCGGCTTCCCGGGCGAAACCGAAGAAGACTTCCAGTACCTGCTCGACTGGCTGACGGAAGCCCAGCTCGACCGCGTCGGCTGCTTCCAGTACTCCCCCGTCGAAGGCGCTCCGGCCAACGAGCTGGGCCTGGAGCCGGTGCCGGACGAGGTCAAGCAGGACCGCTGGGAACGCTTCATGGCCCACCAGCAGGCGATTTCCGCCGCTCGCCTGCAGCTCAAGGTGGGCAAGGAAATCGAAGTGCTGATCGACGAAGTCGACGAACAGGGCGCGGTCGGCCGCTCCTGGGCCGACGCTCCGGAAATCGACGGCAACGTGTTCGTCGACAGCGACGAGCTGAAGCCGGGCGACAAGGTCCGCGTGCGCATCACCGATGCCGACGAGTACGACCTCTGGGCCGAGCTGGTCTGA

Protein Properties

Protein Residues:

440

Protein Molecular Weight:

49 kDa

Protein Theoretical pI:

4.61

Hydropathicity (GRAVY score):

-0.155

Charge at pH 7 (predicted):

-21.08

Protein Sequence:

>PA0916
MSTPTPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAKAESLEVIGEAIAENGKVIVTGCMGVEEHAIRDVHPSVLAVTGPQQYEQVVTAVHEVVPPKTEHNPLVDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLSEAERLVKAGVKELLVISQDTSAYGVDLKYKTDFWNGQPVKTRMKELCEALSSMGVWVRLHYVYPYPNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKQWREICPELTIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANELGLEPVPDEVKQDRWERFMAHQQAISAARLQLKVGKEIEVLIDEVDEQGAVGRSWADAPEIDGNVFVDSDELKPGDKVRVRITDADEYDLWAELV

References

External Links:

Resource	Link
Genome ID:	PA0916
Entrez Gene ID:	880629
NCBI Protein ID:	15596113

General Reference:

PaperBLAST - Find papers about PA0916 and its homologs

Ribosomal protein S12 methylthiotransferase RimO (PA0916)