Identification
Name: Succinyl-diaminopimelate desuccinylase
Synonyms:
  • SDAP desuccinylase
  • N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase
Gene Name: dapE
Enzyme Class:
Biological Properties
General Function: Involved in metallopeptidase activity
Specific Function: Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Cellular Location: Cytoplasmic
KEGG Pathways:
KEGG Reactions:
Thumb+ThumbThumb+Thumb
Thumb+ThumbThumb+Thumb
SMPDB Reactions:
Thumb+ThumbThumb+Thumb
PseudoCyc/BioCyc Reactions:
Thumb+ThumbThumb+Thumb
Thumb+ThumbThumb+Thumb
Complex Reactions: Not Available
Transports: Not Available
Metabolites:
PAMDB IDNameView
PAMDB000360Diaminopimelic acidMetaboCard
PAMDB000836N-Succinyl-L,L-2,6-diaminopimelateMetaboCard
PAMDB000107Succinic acidMetaboCard
PAMDB000142WaterMetaboCard
GO Classification:
Function
binding
catalytic activity
hydrolase activity
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
metallopeptidase activity
peptidase activity
peptidase activity, acting on L-amino acid peptides
protein binding
succinyl-diaminopimelate desuccinylase activity
Process
aspartate family amino acid metabolic process
cellular amino acid and derivative metabolic process
cellular amino acid metabolic process
cellular metabolic process
lysine biosynthetic process
lysine biosynthetic process via diaminopimelate
lysine metabolic process
macromolecule metabolic process
metabolic process
protein metabolic process
proteolysis
Gene Properties
Locus tag: PA1162
Strand: -
Entrez Gene ID: 877783
Accession: NP_249853.1
GI: 15596359
Sequence start: 1259291
Sequence End: 1260442
Sequence Length: 1151
Gene Sequence:
>PA1162
ATGACCGCCTCTTCGCCGAGTCTCTCGCCGACCCTCGAACTCGCCTGCGAGTTGATCCGCCGCCCCTCCGTCACGCCGCTCGACGCCGACTGCCAGGCCCTGATGATGCGCCGCCTGGAAGCCGCCGGCTTCGCCCTGGAGCCGATGCGCATCGAGGAGGTGGACAACTTCTGGGCACGGCGCGGCGGCGACGGCCCGGTGCTGTGCTTCGCCGGGCACACCGACGTGGTCCCCACCGGCCCGCTGCAGGCCTGGCAGCACCAACCCTTCGACGCCCTGATCGACGACCAGGGCATGCTCTGCGGGCGCGGCGCGGCGGACATGAAAGGCAGCCTGGCGTCGATGATCGTCGCCGTCGAGCGCTTCGTCGCCGACCACCCGGAGCACAAGGGTGCCATCGCCTTCCTCATCACCAGCGACGAGGAAGGCCCGGCCCACCACGGCACCAAGGCGGTGGTCGAACGCCTCGCCGCACGCGGCGAGCGCCTGGACTGGTGCATCGTCGGCGAACCGTCGAGCACCAGCCTGGTCGGCGACGTGGTGAAGAACGGCCGCCGCGGCTCCCTCGGCGCCAAGCTGACCATCCGCGGCGTACAGGGCCATGTGGCCTACCCGCACCTGGCGAAGAACCCGATCCACCTGGCCGCCCCGGCGCTGGCCGAACTGGCGGCGGAACACTGGGACGACGGCAATGCCTTCTTCCCGCCGACCAGCTTCCAGGTTTCCAACCTGAACTCCGGCACCGGCGCCACCAACGTCATCCCCGGCGAACTGACCGCGCTGTTCAACTTCCGCTTCTCCACCGAATCCACCGTCGAAGGCCTGCAGAAACGCGTCGAGGCGATCCTCGACAAGCACGGCCTGGACTGGCACGTCGAATGGGCGCTGTCCGGCCTGCCGTTCCTCACCGAGCCGGGCGAACTGCTCGATGCGGTGGCCGCCAGCATCAGGGCGGTCACCGGTCGCGAGACCCAGCCCTCGACCAGCGGCGGCACCTCCGACGGACGCTTCATCGCCACCATGGGCACCCAGGTGGTCGAACTCGGCCCGGTCAACGCCACCATCCACCAGGTCAACGAGCGGGTCCTGGCCAGCGACCTGGAACTGCTCACCGAAATCTACTACCAGACCCTGGTGAGGCTGCTCGCCTGA
Protein Properties
Protein Residues: 383
Protein Molecular Weight: 41.1 kDa
Protein Theoretical pI: 5.01
Hydropathicity (GRAVY score): -0.033
Charge at pH 7 (predicted): -14.01
Protein Sequence:
>PA1162
MTASSPSLSPTLELACELIRRPSVTPLDADCQALMMRRLEAAGFALEPMRIEEVDNFWARRGGDGPVLCFAGHTDVVPTGPLQAWQHQPFDALIDDQGMLCGRGAADMKGSLASMIVAVERFVADHPEHKGAIAFLITSDEEGPAHHGTKAVVERLAARGERLDWCIVGEPSSTSLVGDVVKNGRRGSLGAKLTIRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDDGNAFFPPTSFQVSNLNSGTGATNVIPGELTALFNFRFSTESTVEGLQKRVEAILDKHGLDWHVEWALSGLPFLTEPGELLDAVAASIRAVTGRETQPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVNERVLASDLELLTEIYYQTLVRLLA
References
External Links:
Resource Link
Genome ID: PA1162
Entrez Gene ID: 877783
NCBI Protein ID: 15596359
General Reference: PaperBLAST - Find papers about PA1162 and its homologs