Ribosomal RNA small subunit methyltransferase D (PA0370)

Identification
Name: Ribosomal RNA small subunit methyltransferase D
Synonyms:
  • 16S rRNA m2G966 methyltransferase
  • rRNA (guanine-N(2)-)-methyltransferase
Gene Name: rsmD
Enzyme Class:
Biological Properties
General Function: Involved in nucleic acid binding
Specific Function: Specifically methylates the guanosine in position 966 of 16S rRNA in the assembled 30S particle
Cellular Location: Cytoplasmic
KEGG Pathways: Not Available
KEGG Reactions:
Thumb+rRNA ↔ Thumb+rRNA containing N2-methylguanine
S-Adenosylmethionine + rRNA ↔ S-Adenosylhomocysteine + rRNA containing N2-methylguanine
ReactionCard
SMPDB Reactions: Not Available
PseudoCyc/BioCyc Reactions:
Thumb+rRNA ↔ Thumb+rRNA containing N2-methylguanine
S-Adenosylmethionine + rRNA ↔ S-Adenosylhomocysteine + rRNA containing N2-methylguanine
ReactionCard
Complex Reactions: Not Available
Transports: Not Available
Metabolites:
PAMDB IDNameView
PAMDB000205S-AdenosylhomocysteineMetaboCard
PAMDB000289S-AdenosylmethionineMetaboCard
GO Classification:
Function
binding
catalytic activity
methyltransferase activity
nucleic acid binding
transferase activity
transferase activity, transferring one-carbon groups
Process
cellular macromolecule metabolic process
cellular metabolic process
macromolecule metabolic process
metabolic process
methylation
ncRNA metabolic process
one-carbon metabolic process
RNA metabolic process
rRNA metabolic process
rRNA methylation
rRNA modification
rRNA processing
Gene Properties
Locus tag: PA0370
Strand: -
Entrez Gene ID: 882281
Accession: NP_249061.1
GI: 15595567
Sequence start: 413933
Sequence End: 414529
Sequence Length: 596
Gene Sequence: 
>PA0370
ATGAGCAAACCTACTGCGAAAGCCCCCGGCCGCCACGGCGGCCAGGGACAGCTGCGGATCATCGGTGGCGAATGGCGCAGCCGGCGTTTCGTCTTTCCCGACGGGCCCGGCCTGCGACCGACCCCGGACCGGGTCCGCGAGACCCTGTTCAACTGGCTGGCACCCTATGTCGAAGGCGCACGGGTGCTCGATCCCTTCGCCGGCAGCGGCGCGCTGTTCCTCGAGGCGTTGTCGCGCGGCGCCCGCGAAGGGCTGGCCCTGGATACCAACGGCGAAGCGGTGGCGGCCCTGCGCAACCACCTCGACGCGCTCAAGTGCGGCACCGCCCAACTGGTCCTCGGCGATGCCGTGCGCTACCTGGGAAACCAGGCTCCGAGCGCCTTCGACCTGGTGTTCCTCGACCCGCCGTTCCATCAGAACCTGCTGCAGGACGCCTGCCGCCTGCTCGAAACCCGCGGCTGGCTGAACCCCGACGCCTGGATCTATACCGAGAGCGAGAGCGTCCCCTCGTCCCTCGGCCTGCCCGGAAACTGGCGGCTGCACCGGGAAAAGAAAGCCGGCAACGTACATTACGCGCTCTGGCAGCGGGGAGCCTGA
Protein Properties
Protein Residues: 198
Protein Molecular Weight: 21.7 kDa
Protein Theoretical pI: 9.19
Hydropathicity (GRAVY score): -0.333
Charge at pH 7 (predicted): 4.13
Protein Sequence: 
>PA0370
MSKPTAKAPGRHGGQGQLRIIGGEWRSRRFVFPDGPGLRPTPDRVRETLFNWLAPYVEGARVLDPFAGSGALFLEALSRGAREGLALDTNGEAVAALRNHLDALKCGTAQLVLGDAVRYLGNQAPSAFDLVFLDPPFHQNLLQDACRLLETRGWLNPDAWIYTESESVPSSLGLPGNWRLHREKKAGNVHYALWQRGA
References
External Links:
Resource Link
Genome ID: PA0370
Entrez Gene ID: 882281
NCBI Protein ID: 15595567
General Reference: PaperBLAST - Find papers about PA0370 and its homologs