exoribonuclease RNase R virulence protein VacB (PA4937)

Identification
Name: exoribonuclease RNase R virulence protein VacB
Synonyms: vacB
Gene Name: rnr
Enzyme Class: Not Available
Biological Properties
General Function: mRNA catabolic process, RNA metabolic process
Specific Function: 3'-5'-exoribonuclease activity, ribonuclease R activity, 3'-5' RNA helicase activity, RNA binding, nuclease activity, nucleic acid binding, ribonuclease activity
Cellular Location: Cytoplasmic
KEGG Pathways:
KEGG Reactions: Not Available
SMPDB Reactions: Not Available
PseudoCyc/BioCyc Reactions:
PAMDB000142 → Nucleoside-Monophosphates+Diribonucleotide
Water → Nucleoside-Monophosphates + Diribonucleotide
ReactionCard
Complex Reactions: Not Available
Transports: Not Available
Metabolites: Not Available
GO Classification:
Function
3'-5'-exoribonuclease activity
ribonuclease R activity
3'-5' RNA helicase activity
RNA binding
nuclease activity
nucleic acid binding
ribonuclease activity
Process
mRNA catabolic process
RNA metabolic process
Gene Properties
Locus tag: PA4937
Strand: -
Entrez Gene ID: 879988
Accession: NP_253624.1
GI: 15600130
Sequence start: 5538696
Sequence End: 5541410
Sequence Length: 2714
Gene Sequence: 
>PA4937
ATGGCCGATTGGCAAAACCTCGATCCCGAGGCCGCTCGCGAAGCGGAAAAGTACGAAAACCCCATCCCCAGCCGGGAACTGATCCTGGCTCACCTATCCGAGCGGGGCGCTCCGGCGACTCGCTCCCAGTTGCTCGACGAGTTCGGGCTCGCCGGCGAGGAGCCGGAAGAGGCCTTGCGTCGTCGCCTGCGCGCCATGGAGCGCGACGGGCAGCTTATCTATACGCGTCGTGGCGCCTATGCGCCGGTGGACAAGCTGGACCTGATCCGCGGCCGCATCAGCGGGCACCGCGACGGCTTCGGCTTCCTGATCCCCGACGATGGCAGCGACGACCTGTTCCTCAGTCCCACCCAGATGCGCCTGGTGTTCGACGGCGACCGCGCCCTGGCCCGGGTGTCCGGCCATGACCGGCGCGGACGCCGCGAAGGCCAGCTGGTCGAGGTGATCGAGCGGGCCCACGAGATCGTGGTCGGCCGCTACTTCGAGGAAAGCGGCATCGGCGTGGTGGTCGCGGACAACCCGAAGATCCAGCAGGAAGTCCTGATCCCGCCGGGCAAGGCCGGCAAGGCCAGGCACAACCAGTTCGTCCAGGTGCGCATCGAGCAATGGCCGAGCATCCACCGCCAGGCCCAGGGCGAGATCGTCGAGGTGCTCGGTGACTACATGGCGCCGGGGATGGAGATCGAAGTCGCCCTGCGCAGCTACGATATCCCCCACGTCTGGCCGGCCGCGGTGGAGAAGGAAGCGGCCAAGCTCAAGCCGGAAGTGGCGGAGAAGGACAAGGAAAAGCGTGTCGACCTGCGCCAGGTGCCCTTCGTCACCATCGACGGCGAGGATGCCCGCGACTTCGACGACGCGGTGTACGCCGAGGCCAAGCGCGGCGGCGGCTGGCGCCTGTTCGTGGCGATCGCCGATGTCTCGCACTACGTGAAGGTCGGTTCGGCGCTGGACGAAGAGGCGGCCAGGCGCGGCAACTCGGTGTATTTCCCCGAGCGGGTGATCCCGATGCTGCCGGAGGTGCTGTCCAATGGTCTCTGCTCGCTGAATCCGCTGGTCGACCGGCTGGCCATGGTCTGCGAGATGACCCTGTCCAAGGCTGGCAAGCTGACCGGCTACCAGTTCTACGAAGCGGTGATCCACTCCCATGCCCGCCTGACCTACACCAAGGTCAGCCAGTTGCTCGAGCATCCCGACAGCGTCGAGGCCGAGAACCTGCGCCAGCAGTTGCCCGGCGTGGTGCCGCACCTGCAGCAGCTGTATGCGTTGTATAAAGCGCTGCTGGCCGGCCGCCATGTCCGCGGCGCGATCGATTTCGAGACCCAGGAAACCCGCATCGTCTTCGGCGCCGACCGGAAGATCTCGGAAATCCGCCCGACCCAGCGCAACGATGCGCACCGCCTGATCGAAGAGTGCATGCTCTGCGCCAACGTGGCGACCGCACGCTTCCTGCAGAAGCACGCCATCCCGGCGTTGTACCGGGTGCATGACGGCCCGCCGCAGGAGAAACTCAACAACCTGCGCCAGTTCCTCGGCGAGCTGGGGTTGAGCCTCGGCCGCGGCAAGGCCGCGCCGACCCCGGGCGACTACCAGGAGTTGCTGGAGAAGATCCACGACCGCGCCGACTTCCGCCTGATCCAGACGGTCATGCTGCGTTCGCTCAGCCAGGCGGTGTACAGCCCGGACAACAATGGCCACTTCGGCCTCAACTACGACGCCTACACCCACTTCACCTCGCCGATCCGGCGCTACCCGGACCTGCTGGTGCATCGTGCGATCCGCAGTGTGATCCGCTCCAAGGCGGAGACTCCGCACGTGCAGCGGGCCGGCGCGGCGAGCATGCCCAAGGCGCGTATCTATCCGTACGACGAATTGCGCCTGGACCAGTTGGGCGAGCAGTGCTCGATGACCGAGCGGCGTGCCGACGAGGCCACCCGCGACGTGACCAACTGGCTGAAGTGCGAATACATGCGCGAGCGGGTCGGCGAGACCTTCCCTGGCGTAATCACTGCGGTCACCGGTTTCGGTCTGTTCGTCGAGCTGACCGACATCTTCGTCGAAGGCCTGGTCCATGTGACCGCGCTGCCCGGCGACTACTATCATTTCGACGCCGTGCACCATCGCCTCAGCGGCGAACGCACCGGGCGCAGCTTCCGTCTCGGCGACACCACGGAAGTGGTAGTGGCGCGGGTCGACCTGGACGAGCGGAAGATCGATTTCGAGCTGGCCGGAAACGTGCTGAGCGCGCCGATCGGACGCAAGAAGCGCAACGGCGACAAGTCGGCGAACGCCGGCAAGGCGCCGAAGGGGCGCAAGGGCGCATCCGTGCCCGAGGTCGACCTGGAGCCGGCGCTGGCCAGTCCCGACGCCGCGGTGGTGCCGCGGCGCAAGGCCGGCAAGGTGCAGGCGCTGCCGCCGGTCGCGCCGGAGCTGCTGGCGCAGGCCGCGGAGATGCTCGGCAACACCGACGTGCGCAAGAGTCGCGAGGTGAAGCAGGCGCTGCTCGCCGAGGCGCGTGTCGGCGGCAAGGACAAGGGCGGGAAGAAGGGCAAGGTCGTTCCTGCGGGCAAGAGCGCGAAGGGCAAGGCCAAGGACGGCAAGCCCGCCGCTGCCGCCAAGCCGGGCAAGCCGACCAAGCATCGCAAGGGGCCTTCCAAGCCGAAGGCCGACAACGCTCCGGCCGCCACCGGGGCGCGCAAACGTAAGGCCAAGTCATGA
Protein Properties
Protein Residues: 904
Protein Molecular Weight: 100.1 kDa
Protein Theoretical pI: 9.37
Hydropathicity (GRAVY score): -0.478
Charge at pH 7 (predicted): 18.14
Protein Sequence: 
>PA4937
MADWQNLDPEAAREAEKYENPIPSRELILAHLSERGAPATRSQLLDEFGLAGEEPEEALRRRLRAMERDGQLIYTRRGAYAPVDKLDLIRGRISGHRDGFGFLIPDDGSDDLFLSPTQMRLVFDGDRALARVSGHDRRGRREGQLVEVIERAHEIVVGRYFEESGIGVVVADNPKIQQEVLIPPGKAGKARHNQFVQVRIEQWPSIHRQAQGEIVEVLGDYMAPGMEIEVALRSYDIPHVWPAAVEKEAAKLKPEVAEKDKEKRVDLRQVPFVTIDGEDARDFDDAVYAEAKRGGGWRLFVAIADVSHYVKVGSALDEEAARRGNSVYFPERVIPMLPEVLSNGLCSLNPLVDRLAMVCEMTLSKAGKLTGYQFYEAVIHSHARLTYTKVSQLLEHPDSVEAENLRQQLPGVVPHLQQLYALYKALLAGRHVRGAIDFETQETRIVFGADRKISEIRPTQRNDAHRLIEECMLCANVATARFLQKHAIPALYRVHDGPPQEKLNNLRQFLGELGLSLGRGKAAPTPGDYQELLEKIHDRADFRLIQTVMLRSLSQAVYSPDNNGHFGLNYDAYTHFTSPIRRYPDLLVHRAIRSVIRSKAETPHVQRAGAASMPKARIYPYDELRLDQLGEQCSMTERRADEATRDVTNWLKCEYMRERVGETFPGVITAVTGFGLFVELTDIFVEGLVHVTALPGDYYHFDAVHHRLSGERTGRSFRLGDTTEVVVARVDLDERKIDFELAGNVLSAPIGRKKRNGDKSANAGKAPKGRKGASVPEVDLEPALASPDAAVVPRRKAGKVQALPPVAPELLAQAAEMLGNTDVRKSREVKQALLAEARVGGKDKGGKKGKVVPAGKSAKGKAKDGKPAAAAKPGKPTKHRKGPSKPKADNAPAATGARKRKAKS
References
External Links:
Resource Link
Genome ID: PA4937
Entrez Gene ID: 879988
NCBI Protein ID: 15600130
General Reference: PaperBLAST - Find papers about PA4937 and its homologs